USA flag logo/image

An Official Website of the United States Government

Efficient double hybrid density functional theory algorithms for conformational…

Award Information

Agency:
Department of Health and Human Services
Branch:
N/A
Award ID:
Program Year/Program:
2011 / SBIR
Agency Tracking Number:
R43GM096678
Solicitation Year:
2011
Solicitation Topic Code:
NIGMS
Solicitation Number:
PA10-050
Small Business Information
Q-Chem, Inc.
6601 Owens Drive Suite 105 Pleasanton, CA 94588-3369
View profile »
Woman-Owned: No
Minority-Owned: No
HUBZone-Owned: No
 
Phase 1
Fiscal Year: 2011
Title: Efficient double hybrid density functional theory algorithms for conformational a
Agency: HHS
Contract: 1R43GM096678-01A1
Award Amount: $101,175.00
 

Abstract:

DESCRIPTION (provided by applicant): Double hybrid (DH) density functionals are one of the most promising new developments in quantum mechanical methods for simulating biomolecules. DH functionals have been reported to yield much more accurate intermolecular interaction energies than previous generation functionals. They are therefore on the threshold of becoming widely used. However, there are still practical obstacles blocking widespread use of DH functionals, apart from lack of familiarity to users. ThisSBIR proposal aims to embrace the opportunity of greater accuracy offered by the DH approach by directly addressing the key known limitations. These limitations and our proposed remedies are as follows. (i) DH functionals are more computationally expensive to evaluate than conventional functionals because the cost scales as the 5th power, rather than the 3rd power of molecular size. We will implement and benchmark a novel 3rd order method for evaluating the DH energy without explicit two-electron integrals. The computational savings for biophysically useful accuracy will be assessed on conformational relative energies. (ii) DH functionals require larger atomic orbital basis sets to yield converged relative energies, but doubling the basis requires 16 timesmore computation. We will significantly ameliorate this slow convergence by augmenting the basis to explicitly include interelectronic coordinates, via F12 techniques that have proven successful for wave function methods. This first use of F12 methods to evaluate the DH energy will be benchmarked to assess the reduction in basis set size that is possible without sacrificing accuracy for conformational energies and intermolecular interactions. PUBLIC HEALTH RELEVANCE: to implement a new DFT method ina computationally efficient manner. DFT is at the core of molecular modeling and is applied widely in biological research/development and in drug discovery. The improved DFT will significantly increase researchers' quality of work and extend the application scope of DFT.

Principal Investigator:

Jing Kong
412-687-0695
jkong@q-chem.com

Business Contact:

Jing Kong
412-687-0695
jkong@q-chem.com
Small Business Information at Submission:

Q-CHEM, INC.
5001 BAUM BLVD, STE 690 PITTSBURGH, PA -

EIN/Tax ID: 125177158
DUNS: N/A
Number of Employees: N/A
Woman-Owned: No
Minority-Owned: No
HUBZone-Owned: No