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A TEQ Based Dioxin Kit Utilizing Fluorescent Aptamers

Award Information
Agency: Environmental Protection Agency
Branch: N/A
Contract: EPD06031
Agency Tracking Number: B05C3-0144
Amount: $69,737.00
Phase: Phase I
Program: SBIR
Solicitation Topic Code: 05-NCER-C3
Solicitation Number: PR-NC-05-10246
Timeline
Solicitation Year: 2006
Award Year: 2006
Award Start Date (Proposal Award Date): 2006-03-01
Award End Date (Contract End Date): 2006-08-31
Small Business Information
2445 S. Alston Avenue, Durham, NC, 27713
DUNS: 146017269
HUBZone Owned: N
Woman Owned: Y
Socially and Economically Disadvantaged: N
Principal Investigator
 Bharat Chandramouli
 Science Director
 (919) 281-4040
 chandramouli@enoriverlabs.com
Business Contact
 Moira Smullen
Title: President and CEO
Phone: (919) 281-4029
Email: smullen@enoriverlabs.com
Research Institution
N/A
Abstract
Eno River Labs, LLC, (ERL) proposes to develop an onsite testing kit for dioxins that uses fluorescently tagged ssDNA aptamers for selective binding and subsequent screening and quantitative analysis of dioxin in soil sample.  Current dioxin field test kits are immunoassay based, which are insufficiently specific and sometimes unreliable.  Reliable dioxin testing requires laboratory tests, which can take days to weeks for results.  Our field test kit will provide rapid and easy to use for onsite quantitative testing for dioxin contamination.  Our kit will be based on the use of aptamers, which are specific binding nucleic acids that can be engineered to bind almost any compound with specificity and reliability.  Aptamer mixes also can be designed to have different affinities to the different analytes of interest; therefore, a toxicity equivalency factor (TEF)-scaled kit is possible. In Phase I, ERL proposes to generate a set of specific fluorescent DNA aptamers to bind 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD), the dioxin with the highest TEF.  These dioxin-specific fluorescent aptamers will be developed by the Systematic Evolution of Ligands by Exponential Enrichment (SELEX) technique.  During development, the dioxin-binding aptamers will be tested for their ability to bind specifically to 2,3,7,8-TCDD in the presence of other potential soil contaminants such as polychlorinated biphenyls (PCBs).  In Phase II, ERL plans to define the standard curve for 2,3,7,8-TCDD, develop a TEF-scaled aptamer mix to screen for other toxic congeners, develop the quantitative parameters of ERL’s kit, apply the dioxin-specific aptamers in a lyophilized form to be easily used in the kit, and demonstrate their utility for contaminated soil monitoring.  ERL will test and validate the kit with U.S. Environmental Protection Agency Method 1613B using archived soil samples and performing the analysis in house, thus obviating the need for field sampling. ERL’s kit will be the first, truly TEF-based kit available and will be beneficial for engineering firms and environmental regulators for quick analysis onsite, thus providing a means of contamination monitoring, potential reduction in business risk, and more educated decision on modification in construction plans.  This will benefit society by reducing the risk of using contaminated land for commercial or private use.  In summary, ERL’s onsite kit will offer a nontoxic environmentally friendly, fast, reliable test for dioxin contamination in soil.

* Information listed above is at the time of submission. *

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